Hugging Peers

Karen Eilbeck

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19 papers 1999–2025

Semantics-oriented data science and computational life sciences: Innovative application of semantic technologies in microRNA and lncRNA research

Jingshan Huang, Dejing Dou, Ming Tan, Glen M. Borchert, Karen Eilbeck, Alan Ruttenberg
+1 more show fewer
Ping Yang
2017-01 ICCABS

A domain ontology for the Non-Coding RNA field

Jingshan Huang, Karen Eilbeck, Judith A. Blake, Dejing Dou, Darren A. Natale, Alan Ruttenberg
+11 more show fewer
Barry Smith, Michael T. Zimmermann, Guoqian Jiang, Yu Lin, Bin Wu, Yongqun He, Shaojie Zhang, Xiaowei Wang, He Zhang, Zixing Liu, Ming Tan
2015-01 BIBM

A semantic approach for knowledge capture of MIcroRNA-Target gene interactions

Jingshan Huang, Fernando Gutierrez, Dejing Dou, Judith A. Blake, Karen Eilbeck, Darren A. Natale
+6 more show fewer
Barry Smith, Yu Lin, Xiaowei Wang, Zixing Liu, Ming Tan, Alan Ruttenberg
2015-01 BIBM

Exploring the use of ontologies and automated reasoning to manage selection of reportable condition lab tests from LOINC

Karen Eilbeck, Jason R. Jacobs, Sunanda R. McGarvey, Cynthia Vinion, Catherine J. Staes
2013-01 ICBO

Efforts toward a More Consistent and Interoperable Sequence Ontology

Michael Bada, Karen Eilbeck
2012-01 ICBO

Straight-Line Drawings of Protein Interactions

Wojciech Basalaj, Karen Eilbeck
1999-01 GD

Optimize Querying of LOINC® with an Ontology: Give Me the Chlamydia Tests the Epidemiologists Want Me to Use!

Karen Eilbeck, Jason R. Jacobs, Catherine J. Staes
2013-01 HICSS

Continuous Predictive Modelling for Sepsis, Organ Failure, and In-hospital Mortality in the Intensive Care Unit

Amber Kiser, Devin Horton, Karen Eilbeck, Samir E. AbdelRahman
2019-01 AMIA

LocalVar: a local variant collection manager to asynchronously detect synonyms, HGVS expression changes, and variant interpretation changes from ClinVar

Michael T. Watkins, Wendy Kohlmann, Therese Berry, Neetha Sama, Cathryn Koptiuch, Shawn Rynearson
+1 more show fewer
Karen Eilbeck
2022-01 AMIA

Evaluation of need for ontologies to manage domain content for the Reportable Conditions Knowledge Management System

Karen Eilbeck, Julie Lipstein, Sunanda R. McGarvey, Catherine J. Staes
2014-01 AMIA

Utilization of BPM+ Health for the Representation of Clinical Knowledge: A Framework for the Expression and Assessment of Clinical Practice Guidelines (CPG) Utilizing Existing and Emerging Object Management Group (OMG) Standards

Robert F. Lario, Steve Hasely, Stephen White, Karen Eilbeck, Richard Soley, Stan Huff
+1 more show fewer
Kensaku Kawamoto
2020-01 AMIA

Implementing the VMC specification to reduce ambiguity in genomic variant representation

Michael T. Watkins, Shawn Rynearson, Alex Henrie, Karen Eilbeck
2019-01 AMIA

Clinical Decision Support for Whole Genome Sequence Information Leveraging a Service-Oriented Architecture: a Prototype

Brandon M. Welch, Salvador Loya, Karen Eilbeck, Kensaku Kawamoto
2014-01 AMIA

Using KaOS Ontologies to Model Policy Requirements for a Statewide Master Person Index

Jeffrey Duncan, Karen Eilbeck, Catherine J. Staes, Scott P. Narus, Stephen Clyde
2013-01 AMIA

INTERACT: An Object Oriented Protein-Protein Interaction Database

Karen Eilbeck, Andy Brass, Norman W. Paton, Charlie Hodgman
1999-01 ISMB

Using GVF for Clinical Annotation of Personal Genomes

Barry Moore, Shawn Rynearson, Fiona Cunningham, Graham R. S. Ritchie, Karen Eilbeck
2012-01 AIMM

Student Perspectives from the International Partnership for Health Informatics Education (IPHIE) 2024 Master Class

Evan Christensen, Courtney Gauchel, Lourdes Valdez, Chinmayee Rayguru, Kseniia Sholokhova, Umashankar Upadhyay
+7 more show fewer
Sari Rahmawati Kusuma Dewi, Marco Aigner, Monica Phariss, Minke C. Holleboom, Cynthia Groenevelt, Karen Eilbeck, Shabbir Syed Abdul
2025-01 MedInfo

GIMS - A Data Warehouse for Storage and Analysis of Genome Sequence and Functional Data

Mike Cornell, Norman W. Paton, Shengli Wu, Carole A. Goble, Crispin J. Miller, Paul Kirby
+4 more show fewer
Karen Eilbeck, Andy Brass, Andrew Hayes, Stephen G. Oliver
2001-01 BIBE